so just an update on my bike, in total I found bad seals in the water pump (which I'm not a big fan on how you need to split the case to replace), a bad rad fan switch and it appears my Temperature sensor is fried as well. I replaced the bad seal, replaced the rad fan switch, gave it an oil change, filled with new clean coolant. I'm still waiting for the temperature sensor to come in the mail but seeing as a lot of bikes don't have temp gauges i'm not too concerned with it.
One more thing does anyone know if I need to take the bike in to get the faults cleared with the PDA or will they clear themselves or is there a reset procedure?